Biology Graduate Modules
BIOL5710, Department of Biology, Dalhousie University
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BIOL 5710 Graduate Modules 2026/2027
NOTE:
The module list will be updated as the
descriptions are submitted. The final number of modules
could > or < 10. Please check in regularly for
updates. You will be notified via e-mail when the
list is finalized.
|
No. |
Short Title |
Instructor |
Date |
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| |
|
|
|
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|
1 |
Analyzing acoustic
telemetry data |
Lennox |
Fall |
|||||||||
|
2 |
A practical guide to peer
review |
Edwards |
Feb |
|||||||||
|
3 |
Graphic design for scientists | Schmidt | Winter |
|||||||||
|
4 |
Writing
science |
Lunzmann-Cooke |
Winter |
|||||||||
|
5 |
Dynamic
energy budget theory |
Filgueira |
Feb/Mar | |||||||||
|
6 |
The Krebs cycle in life and death |
Guderley |
Fall |
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|
7 |
Global biodiversity change |
Carvajal-Quintero |
Fall |
|||||||||
|
8 |
The science-policy interface |
Worm | Fall |
|||||||||
|
9 |
The
value of long-term field studies |
Whitehead | Jan |
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|
10 |
Chemical biomarkers in coral ecology | Budge | Fall |
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| 11+ | FoA module selection (link to their site) | see ag website | ||||||||||
On-line modules: (as necessary)
(Note: The Biology program does not offer modules over the summer.)
Individual module descriptions
|
1 |
|
|
Title: |
Analyzing acoustic telemetry data
|
|
Instructor(s): |
Dr. Robert Lennox |
|
Preferred time: |
Friday, 8:30am; likely
Sept; details to follow |
|
Contact: |
(902)
399-6139 | lennox@dal.ca |
|
Description: |
In this module students will get
instruction on spatial analysis of animal
tracking data using acoustic telemetry. Students
will learn concepts related to visualisation and
common statistical tools and packages using R
programming. Students will have access to
example data sets and have assignments to work
on to demonstrate skills with the class. |
|
2 |
|
|
Title: |
Becoming reviewer 1:
A practical guide to peer review |
|
Instructor(s): |
Dr. Jena Edwards |
|
Preferred time: |
Monday
and Wednesday mornings, winter semester (Feb)
[timing flexible] |
|
Contact: |
(902) 717-0223
| jena.edwards@dal.ca |
|
Description: |
So you’ve just published your first
scientific article (woohoo!) and are now
being asked to conduct a peer review.
Perhaps you don’t feel ready, or aren’t
sure whether you have the experience or
expertise to take on the task. The truth
is, we all reach this stage and face those
same questions at some point in our
academic careers. This course will introduce you to the peer review process, from deciding when to accept an invitation and determining whether a manuscript is a good fit for your expertise, to providing a thoughtful, constructive, and useful review. By reading and evaluating scientific articles together, we will practice the art of reading critically and identifying common pitfalls that should be addressed prior to publication. We will also consider how effectively scientific information is communicated, both in the text and through figures and tables. By the end of this course, you will have developed practical skills for getting more out of your reading, streamlining your own publications, and providing constructive feedback to your scientific peers. The ultimate goal is to be a great reviewer, without becoming Reviewer 2. |
|
3 |
|
|
Title: |
Graphic
design for scientists |
|
Instructor(s): |
Dr.
Chloé Schmidt |
|
Preferred time: |
Friday
mornings, winter semester (tentative) |
|
Contact: |
902 431 0348 |
chloe.schmidt@dal.ca |
|
Description: |
Science
visualizations are one of the main ways we
communicate ideas and findings to peers,
colleagues, stakeholders, and the public. In this
module we’ll discuss graphic design concepts as
tools for effective communication and build
practical skills for creating figures, diagrams,
presentation slides, and posters. During the
course students will learn how to use Inkscape (an
open-source vector graphics software), some basics
and tips for making visualizations in R, and be
provided with design resources. No prior artistic
skills or experience needed! |
|
4 |
|
|
Title: |
Writing science: How to
communicate your science clearly |
|
Instructor(s): |
Dr. Emma
Lunzmann-Cooke |
|
Preferred time: |
Winter semester,
Tuesday/Thursday mornings [timing
flexible] |
|
Contact: |
613-282-8423
| emmallcooke@gmail.com |
|
Description: |
Do you ever wonder why
some papers are easy to read while others
feel like a chore? This module is about
learning how to improve your scientific
writing and make your research easier to
read and understand. We will work through
examples and exercises to learn how to
keep your reader engaged, make your
sentences and paragraphs more concise, and
edit effectively. Whether you are drafting
a manuscript, abstract, or writing any
other piece of science communication,
learning how to write effectively and
communicate clearly is a skill that will
benefit you throughout your career. |
|
5 |
|
|
Title: |
Introduction
to Dynamic Energy Budget (DEB)
Theory |
|
Instructor(s): |
Dr. Ramón Filgueira |
|
Preferred time: |
Feb / Mar: Mornings (Monday-Wednesday |
|
Contact: |
902-414-1218
|
ramon.filgueira@dal.ca |
|
Description: |
This module introduces the
foundations of Dynamic Energy Budget theory
through a review of the introductory chapters of
Kooijman’s “Dynamic Energy Budget Theory for
Metabolic Organisation”. The module focuses on
the core assumptions of DEB and their
implications for bioenergetics, from acquisition
to allocation of energy to maintenance, under
fluctuating environments. |
|
6 |
|
|
|
Life and death in the spinning of the Krebs cycle |
|
Instructor(s): |
Dr. Helga Guderley |
|
Preferred time: |
Fall: Tuesday
13:00-14:50 |
|
Contact: |
902-820-2979 |
902-266-8046 |
helga@guderley.ca |
|
Description: |
One of the most creative thinkers in bioenergetics, Nick Lane, has put together a book examining why the exact role of the Krebs cycle, the perfect system we all memorized that is at the heart of metabolism, remains so elusive more than 80 years after its discovery. Textbooks teach us that this cycle removes hydrogen from carbon skeletons and that these hydrogens allow mitochondrial metabolism to generate ATP by transporting electrons and protons. But is that the original role of the Krebs cycle? In this book, Nick Lane explains how the Krebs cycle and its role in energy metabolism was discovered, he shows how this cycle, spinning in reverse created the chemical building blocks of life and allowed the emergence of life. He shows how in multicellular animals, spinning the Krebs cycle in reverse is related to aging, cancer and death. The liner notes describe the book’s contents as follows: “What brings the earth to life and our own lives to an end? Transformer unites the story of our planet with the story of our cells – what makes us the way we are and how it connects us to the origin of life.” This module will analyze Lane’s book, Transformer, with discussions guided by myself and module members of the different chapters of the book. The book is available from Amazon in paperback for $25. I propose 3-4 meetings, on Tuesday afternoons in late October and November, but am open to alternative afternoons. . |
|
7 |
|
|
Title: |
The
Nuances of Global Biodiversity Change |
|
Instructor(s): |
Dr. Juan
Carvajal-Quintero |
|
Preferred time: |
Monday
mornings, fall term |
|
Contact: |
902-431-0500
| juan.carvajal@dal.ca
|
|
Description: |
Biodiversity change is a defining
phenomenon of the Anthropocene, an era in
which human activities are profoundly
reshaping the biosphere. Discussions of
biodiversity change have traditionally focused
on human-driven species declines and
extinctions. However, biodiversity encompasses
much more than species richness and population
abundances, and human pressures can alter
multiple facets of biodiversity, including
functional, genetic, phylogenetic, and
interaction diversity. In this module, we will
read and discuss key papers on biodiversity
change in the Anthropocene, exploring the many
nuances of biodiversity change across
different facets and environmental contexts. |
|
8 |
|
|
Title: |
Making your science matter: how
early-career scientists can contribute to
management and policy |
|
Instructor(s): |
Dr.
Boris Worm |
|
Preferred time: |
TUE,
THU afternoon |
|
Contact: |
902-210-8330
| bworm@dal.ca |
|
Description: |
This module is
designed for graduate students who
are curious about designing
projects with direct management or
policy relevance in the
environmental and health sciences
and engaging with affected
stakeholders. Many papers claim
that their results have important
implications for management and
policy, but how can we follow up
on this promise and make sure that
our science is used in an
effective and responsible way?
Through a series of guest
lectures, hands-on activities,
workshops and student-led
discussions we will learn from
each other and from scientists who
have successfully navigated the
science-policy interface. We will
cover both the research set-up by
focusing on how to thoughtfully
conceptualize research questions
with existing real-world policies
or emerging geo-political agendas,
as well as the analysis, which may
combine aspects of both
quantitative and qualitative data.
We envision 6-8 sessions of 90
minutes each, depending on
people’s schedules and
capacity. |
|
9 |
|
|
Title: |
The value of long-term studies in
ecology, evolution and behaviour |
|
Instructor(s): |
Dr.
Hal
Whitehead |
|
Preferred time: |
January |
|
Contact: |
(902)
414-6140 |
hwhitehe@dal.ca |
|
Description: |
Long-term
field studies have given us remarkable
insight into ecology, evolution and
behaviour. Examples include the Experimental
Lakes Area studies, the Grants’ studies of
Galapagos finch evolution, and the Gombe
Stream study of chimpanzees. We will look what long-term studies have achieved and which results could only have been achieved with a long-term study. The challenges of long-term studies include. environmental change, logistics, finances, consistency, and personal. The class will begin with a general summary of long-term studies, and a description of one such study, by HW. Then each student will describe a different long-term study: how it operated, its successes, its failures, and how it overcame the challenges inherent in all long-term studies, and particular to the study in question. Students will be marked based on their presentation as well as a short report on the study that they presented, and very brief assessment of all the studies presented. |
| 10 |
|
|
Title: |
Chemical
biomarkers in coral ecology
|
|
Instructor(s): |
Dr.
Suzanne Budge |
|
Preferred time: |
Fall term (late Fall) |
|
Contact: |
(902) 494-6010
| budges@dal.ca |
|
Description: |
We will review the use
of lipids, and bulk and
compound-specific isotopes in coral
ecology, using recent literature as
examples. We will provide basic theory
relevant to the approaches, including
lipid metabolism and coral physiology.
Students will develop sufficient
understanding to assess the quality of
applications in current literature.
Their grade will be based on their
review with presentation and written
critique of a relevant paper in the
field. |
|
11 |
|
|
Title: |
Module 11 |
|
Instructor(s): |
TBD |
|
Preferred time: |
TBD |
|
Contact: |
Dr.
XXX: (902) xxx-xxx | xxx.xxxxx@dal.ca
|
|
Description: |
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|
12 |
|
|
Title: |
Module 12 |
|
Instructor(s): |
TBD |
|
Preferred time: |
TBD |
|
Contact: |
name.name@Dal.Ca
| 902 xxx xxxx (office) |
|
Description: |
TBD |
| |
|
11+ |
|
|
Title: |
Faculty of Agriculture module selection (link to their site) |
|
Instructor(s): |
Faculty of Agriculture |
|
Preferred time: |
link to their site |
|
Contact: |
link to their site |
|
Description: |
Modules offered through the Faculty of
Agriculture (formerly NSAC) do count towards
BIOL5705/5706. |